| Class and Description |
|---|
| CodemlOptions
Support class for the GUICodemlOptions for choosing (other) Codeml options.
|
| CodemlTP
Class to handle PAML (Codeml) results and input data.
|
| FileFormat
Class for storing basic information about Sequence Files.
|
| FileFormatConverter
Implementation of functions to read/write several formats of MSA files.
|
| GUIProgExecOutput
Implementation of external program execution output viewer.
|
| ResultsN3DTP
Class to handle necessary computation and data storage for general or final results.
Results from previous tabs and from resources like Jmol and Swiss Model. |
| Utilities
Utilities used across the whole software package.
|